dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002414_1|CGC33
Gene ID: MGYG000002414_01538
Location and strand information: 1756519 - 1757640 (+)
Family: GH88
Protein type: CAZyme
Protein description: Unsaturated glucuronyl hydrolase
Protein isoelectric point: 5.0356
Protein molecular weight: 42975.84
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002414_1|CGC33
Gene ID: MGYG000002414_01539
Location and strand information: 1757630 - 1759792 (+)
Family: PL12
Protein type: CAZyme
Protein description: Heparin-sulfate lyase
Protein isoelectric point: 5.4512
Protein molecular weight: 83004.88
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002414_1|CGC33
Gene ID: MGYG000002414_01540
Location and strand information: 1759860 - 1761581 (+)
Family: 8.A.59.2.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002414_1|CGC33
Gene ID: MGYG000002414_01541
Location and strand information: 1761581 - 1763164 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: HTH-type transcriptional activator RhaR

Gene clsuter ID: MGYG000002414_1|CGC33
Gene ID: MGYG000002414_01542
Location and strand information: 1763334 - 1764263 (+)
Family: 3.A.1.1.20
Protein type: TC
Protein description: Lactose transport system permease protein LacF

Gene clsuter ID: MGYG000002414_1|CGC33
Gene ID: MGYG000002414_01543
Location and strand information: 1764279 - 1765115 (+)
Family: 3.A.1.1.34
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000002414_1|CGC33
Gene ID: MGYG000002414_01544
Location and strand information: 1765257 - 1766654 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002414_1|CGC33
Gene ID: MGYG000002414_01545
Location and strand information: 1766770 - 1768044 (+)
Family: CBM32|GH29
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.6636
Protein molecular weight: 47978.06
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002414_1|CGC33
Gene ID: MGYG000002414_01546
Location and strand information: 1768070 - 1769902 (+)
Family: GH35
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 4.5397
Protein molecular weight: 68655.67
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002414_1|CGC33
Gene ID: MGYG000002414_01547
Location and strand information: 1769944 - 1777911 (+)
Family: CBM70|PL8
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.805
Protein molecular weight: 287962.35
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002414_1|CGC33
Gene ID: MGYG000002414_01548
Location and strand information: 1778074 - 1778781 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002414_1|CGC33
Gene ID: MGYG000002414_01549
Location and strand information: 1778890 - 1780386 (+)
Family: GH51
Protein type: CAZyme
Protein description: Intracellular exo-alpha-L-arabinofuranosidase 2
Protein isoelectric point: 5.0626
Protein molecular weight: 56007.2
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002414_1|CGC33
Gene ID: MGYG000002414_01550
Location and strand information: 1780399 - 1780680 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002414_1|CGC33
Gene ID: MGYG000002414_01551
Location and strand information: 1780730 - 1781644 (-)
Family: HTH_5
Protein type: TF
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002414_1|CGC33
Gene ID: MGYG000002414_01552
Location and strand information: 1781837 - 1786633 (-)
Family: CBM13|GH43|GH43_4|CBM54
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.6463
Protein molecular weight: 171629.68
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002414_1|CGC33
Gene ID: MGYG000002414_01553
Location and strand information: 1787114 - 1788019 (-)
Family: HTH_5
Protein type: TF
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002414_1|CGC33
Gene ID: MGYG000002414_01554
Location and strand information: 1788296 - 1789540 (+)
Family: SBP_bac_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002414_1|CGC33
Gene ID: MGYG000002414_01555
Location and strand information: 1789620 - 1790498 (+)
Family: 3.A.1.1.23
Protein type: TC
Protein description: L-arabinose transport system permease protein AraP

Gene clsuter ID: MGYG000002414_1|CGC33
Gene ID: MGYG000002414_01556
Location and strand information: 1790552 - 1791448 (+)
Family: 3.A.1.1.36
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000002414_1|CGC33
Gene ID: MGYG000002414_01557
Location and strand information: 1791553 - 1792512 (+)
Family: GH43_26|GH43|CBM42
Protein type: CAZyme
Protein description: Extracellular exo-alpha-(1->5)-L-arabinofuranosidase
Protein isoelectric point: 4.8481
Protein molecular weight: 36605.9
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002414_1|CGC33
Gene ID: MGYG000002414_01558
Location and strand information: 1792844 - 1793656 (-)
Family: 3.A.1.126.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002414_1|CGC33
Gene ID: MGYG000002414_01559
Location and strand information: 1793653 - 1794591 (-)
Family: 3.A.1.126.1
Protein type: TC
Protein description: Vitamin B12 import ATP-binding protein BtuD

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000002414_01538	GH88_e27\|3.2.1.-	hostglycan
MGYG000002414_01539	PL12_e4
MGYG000002414_01545	GH29_e19\|CBM32_e70\|3.2.1.51\|3.2.1.111	hostglycan
MGYG000002414_01546	GH35_e2\|3.2.1.38\|3.2.1.23\|3.2.1.-	pectin\|beta-galactan
MGYG000002414_01547	PL8_e20\|CBM70_e1\|4.2.2.1
MGYG000002414_01549	GH51_e14\|3.2.1.55	arabinan
MGYG000002414_01552	GH43_e54\|CBM54_e3\|CBM13_e83\|3.2.1.99\|3.2.1.58\|3.2.1.39	arabinan
MGYG000002414_01557	GH43_e158\|CBM42_e13\|3.2.1.-	xylan

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is host glycan|arabinan

Substrate predicted by dbCAN-PUL is arabinan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002414_01538	Unsaturated glucuronyl hydrolase	CAZyme	1756519	1757640	+	GH88
MGYG000002414_01539	Heparin-sulfate lyase	CAZyme	1757630	1759792	+	PL12
MGYG000002414_01540	hypothetical protein	TC	1759860	1761581	+	8.A.59.2.1
MGYG000002414_01541	HTH-type transcriptional activator RhaR	TF	1761581	1763164	+	HTH_AraC+HTH_AraC
MGYG000002414_01542	Lactose transport system permease protein LacF	TC	1763334	1764263	+	3.A.1.1.20
MGYG000002414_01543	L-arabinose transport system permease protein AraQ	TC	1764279	1765115	+	3.A.1.1.34
MGYG000002414_01544	hypothetical protein	null	1765257	1766654	+	No domain
MGYG000002414_01545	hypothetical protein	CAZyme	1766770	1768044	+	CBM32\| GH29
MGYG000002414_01546	Beta-galactosidase	CAZyme	1768070	1769902	+	GH35
MGYG000002414_01547	hypothetical protein	CAZyme	1769944	1777911	+	CBM70\| PL8
MGYG000002414_01548	hypothetical protein	null	1778074	1778781	+	DUF421
MGYG000002414_01549	Intracellular exo-alpha-L-arabinofuranosidase 2	CAZyme	1778890	1780386	+	GH51
MGYG000002414_01550	hypothetical protein	null	1780399	1780680	+	DUF6171
MGYG000002414_01551	hypothetical protein	TF	1780730	1781644	-	HTH_5
MGYG000002414_01552	hypothetical protein	CAZyme	1781837	1786633	-	CBM13\| GH43\| GH43_4\| CBM54
MGYG000002414_01553	hypothetical protein	TF	1787114	1788019	-	HTH_5
MGYG000002414_01554	hypothetical protein	STP	1788296	1789540	+	SBP_bac_1
MGYG000002414_01555	L-arabinose transport system permease protein AraP	TC	1789620	1790498	+	3.A.1.1.23
MGYG000002414_01556	L-arabinose transport system permease protein AraQ	TC	1790552	1791448	+	3.A.1.1.36
MGYG000002414_01557	Extracellular exo-alpha-(1->5)-L-arabinofuranosidase	CAZyme	1791553	1792512	+	GH43_26\| GH43\| CBM42
MGYG000002414_01558	hypothetical protein	TC	1792844	1793656	-	3.A.1.126.1
MGYG000002414_01559	Vitamin B12 import ATP-binding protein BtuD	TC	1793653	1794591	-	3.A.1.126.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature